Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015807602.1_cds_XP_016494893.1_9268
CDS Infomation

[gene=LOC107814077] [db_xref=GeneID:107814077] [protein=sister chromatid cohesion 1 protein 1-like] [protein_id=XP_016494893.1] [location=complement(join(19406..19488,19600..19712,19805..19889,19985..20136,20340..20418,20508..20706,20786..20868,20947..21112,21332..21493,21580..21650,22045..22154,22307..22385,22508..22577,22960..23080,23263..23342,23481..23500,23613..23657,23728..23758))] [gbkey=CDS]
Sequence

ATGGCTCTGCGACTTTCTGGAATTCTCATGGGTGGAGTCGTCATTGTTTACGAACGCAAA
GTGAAACTCCTTTATGATGATGTGACTCGTCTCATGGTGCAAATCAATGAAGCTTGGAAG
GTGAAATCAGCAGCTCCCGATCCTACGTTGCTTCCCAAGAGTAAAGTGCAAGCCAAGTAT
GAAGCTGTTACTCTGCCGGAAAACCGGGAGGAAGAACTCCCGGAGATTGAACAGACAATG
CGAAATTCGGACACTGTCACAATGATGGGTTTCGAACAGACCTCGTATTTCGCGATGAGA
CTAGATAATGTAGACCTCTATGATAAACCCAATGCACAGGAAGAACCTGCCCAGGACTTT
CATCAAGTTGATCTAGATAATATCACCCTGGCTGAACATTTTGATGCCCATCAGGCAGAT
TCAGATATGTTTAATCATTTTGAGAGGTTTGATATTGAAGGGGATGAAGAAACACAAATG
AATTTTACCCAGCCAGAGGAAGCTCAAATCCCAAGTACTCTTGTGCCATCTCCACCCCGA
CAAGAAGCCCATCAACCTGATGAGATCCCTGACAGACATCCAGAGGAGCAAGTGAAGCAA
CAATCTGAAGCTGAAGAAGTTTTTGAGAGACAGCAGGACCAACAAAGGCCAAAGCCAGCT
CGACAAAGAGCAAGAAAATTAGCGCGTCTTGCAATTGACAATGAACAAACTATTATTCCT
GGTCACATATATCATACCTGGCTTCAGGGTTCTTCAGATATTGTATCAAGAACAAGGAAA
AAGAGAAAGACTTTGAGTGCCTCATCTTCTATGAAGATAGGCAGACTCATGGAGGTGCCT
CCTATTGCATTACTAGAAGGGTTGCTCACAAATGGAAATAGGGAAGTTCACTATCCAGCA
CCACTCTTAAAATTGTGGTTACGAAGTACCCAACCTCCCCATGATTCACCTTCTGGAAAG
ACCTCTCCGCCTTATCCTCCTGAACCATCCTACACATCTCCAGCTGAAAGGATGCACAAT
TTTGAACCTGTCAGATATCCTTTGGAAGAGTTCCAAACTGGTGTAGGTTCCCCATCAGTA
GGGATCTCCATAGAGAAACAAAGGGCAAATGTCAATAATAACGTGATTCCACCTGATCTC
ATGGAGGACCTCAGGACCAATCTTACAAACCTCGGACTGCATCCAAAAGAGGTTAATGGA
GTGAATGAGACCAATCACATGGCCACACCTGGCTCTGGTGATGAGCCTAGATCCATTCCA
AGCTCAGGATCTGATCATGGTTACCTATCACAGAACTCCATAACCAATTCAAACCGGTCC
AACAAGAAAAGACCCCATTCTTCATCGAGGCACGGTGCAAGTGGCCTTGAACCAGTAGCA
GAAGAGTACCAATGGCACCATCCTGATCCAACTTTCAAGATTGCTAGACTATCTGAACTA
TCAGAGAATGGTTATACACCAGACAATGAGATGTTGATGGAAACTGGACCAACACAAACC
CAACATCAATTCACTACTCAACCTCTTGACAAGATGACTGACACTATCAGGATGCAGCTG
AAGAGTCACTTTGACACTCCTGGATCAGCCAAAGCAGAATGTCTGAATGAACTAACTCTT
GGGATGACAAAGAAACAAGCAGCGTGTCTCTTTTATCAGGCTTGTGTTCTGGCCACTCGG
GACTTTATAAAAGTCGAACAGGAGGCGCCATATGGGGACATTCTCATTTCAAGAGGTGCA
AAGATGTGA

Peptide Sequence

PEP ID

XP_016494893.1
PEP Infomation

PREDICTED: sister chromatid cohesion 1 protein 1-like [Nicotiana tabacum]
Sequence

MALRLSGILMGGVVIVYERKVKLLYDDVTRLMVQINEAWKVKSAAPDPTLLPKSKVQAKY
EAVTLPENREEELPEIEQTMRNSDTVTMMGFEQTSYFAMRLDNVDLYDKPNAQEEPAQDF
HQVDLDNITLAEHFDAHQADSDMFNHFERFDIEGDEETQMNFTQPEEAQIPSTLVPSPPR
QEAHQPDEIPDRHPEEQVKQQSEAEEVFERQQDQQRPKPARQRARKLARLAIDNEQTIIP
GHIYHTWLQGSSDIVSRTRKKRKTLSASSSMKIGRLMEVPPIALLEGLLTNGNREVHYPA
PLLKLWLRSTQPPHDSPSGKTSPPYPPEPSYTSPAERMHNFEPVRYPLEEFQTGVGSPSV
GISIEKQRANVNNNVIPPDLMEDLRTNLTNLGLHPKEVNGVNETNHMATPGSGDEPRSIP
SSGSDHGYLSQNSITNSNRSNKKRPHSSSRHGASGLEPVAEEYQWHHPDPTFKIARLSEL
SENGYTPDNEMLMETGPTQTQHQFTTQPLDKMTDTIRMQLKSHFDTPGSAKAECLNELTL
GMTKKQAACLFYQACVLATRDFIKVEQEAPYGDILISRGAKM

Transcript Sequence

Gene sequence data has not been registered.